Nature

Safeguards for donors.

none; (Journal Article)

Silent running: the race to the clinic.

none; (Journal Article)

The moses of silicon valley.

Grant; (Journal Article)

Nutrient regulates Tor1 nuclear localization and association with rDNA promoter.

Li, Tsang, Watkins, Bertram, Zheng; (JOURNAL ARTICLE)

Fair payment or undue inducement?

Hyun; (Journal Article)

Views collide over fate of accelerator.

Brumfiel; (Journal Article)

Subterranean storage blues.

Mackerron; (Journal Article)

New in paperback.

none; (Journal Article)

In brief.

none; (Journal Article)

Materials science: Organosilica the conciliator.

Jaroniec; (Journal Article)

The emergence of geometric order in proliferating metazoan epithelia.

Gibson, Patel, Nagpal, Perrimon; (JOURNAL ARTICLE)

Microscopy: Nanotomography comes of age.

Attwood; (Journal Article)

News in brief.

none; (Journal Article)

Toronto crossroads.

none; (Journal Article)

Research highlights.

none; (Journal Article)

Plan for postdoc union sparks backlash.

Ledford; (Journal Article)

Solar System: Sifting through the debris.

Cooray; (Journal Article)

Making the paper: Hsiang-Kuang Chang.

none; (Journal Article)

Transgeneration memory of stress in plants.

Molinier, Ries, Zipfel, Hohn; (JOURNAL ARTICLE)

Making sense of autism.

Happé; (Journal Article)

Neurodegenerative disease: Cut to the chase.

Ellerby, Orr; (Journal Article)

Occultation of X-rays from Scorpius X-1 by small trans-neptunian objects.

Chang, King, Liang, Wu, Lin, Chiu; (Journal Article)

AIDS treatment: Staying the course.

Check; (Journal Article)

Key collaborations.

none; (Journal Article)

50 & 100 years ago.

none; (Journal Article)

Sticking points in the push for change.

Rosa; (Journal Article)

Making a move.

Powell; (Journal Article)

Oil from bombed plant left to spill.

Smith; (Journal Article)

Market watch.

Schiermeier; (Journal Article)

The dynamics of melt and shear localization in partially molten aggregates.

Katz, Spiegelman, Holtzman; (Journal Article)

Statler pulchrifex.

Weber; (Journal Article)

Putting the carbon back: Black is the new green.

Marris; (Journal Article)

Supercurrent reversal in quantum dots.

van Dam, Nazarov, Bakkers, De Franceschi, Kouwenhoven; (Journal Article)

Tracking the motion of charges in a terahertz light field by femtosecond X-ray diffraction.

Cavalleri, Wall, Simpson, Statz, Ward, Nelson, Rini, Schoenlein; (Journal Article)

Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice.

Xu, Xu, Fukao, Canlas, Maghirang-Rodriguez, Heuer, Ismail, Bailey-Serres, Ronald, Mackill; (Journal Article)

Sidelines.

none; (Journal Article)

Capturing carbon.

none; (Journal Article)

A probable stellar solution to the cosmological lithium discrepancy.

Korn, Grundahl, Richard, Barklem, Mashonkina, Collet, Piskunov, Gustafsson; (Journal Article)

Systems biology could help us harness useful microbes.

Young; (Journal Article)

Abstractions.

none; (Journal Article)

Cosmology: Where all the lithium went.

Charbonnel; (Journal Article)

AIDS vaccine research becomes 'big science'.

Butler; (Journal Article)

Scientists are well placed to speak up for biodiversity.

Chapron; (Journal Article)

Correction.

none; (Journal Article)

Putting the carbon back: The hundred billion tonne challenge.

Schiermeier; (Journal Article)

Synchrotron X-ray tomographic microscopy of fossil embryos.

Donoghue, Bengtson, Dong, Gostling, Huldtgren, Cunningham, Yin, Yue, Peng, Stampanoni; (Journal Article)

Ethicists and biologists ponder the price of eggs.

Check; (Journal Article)

Health effects of egg donation may take decades to emerge.

Pearson; (Journal Article)

Plant breeding: Rice in deep water.

Sasaki; (Journal Article)

Minimal ProtoHox cluster inferred from bilaterian and cnidarian Hox complements.

Chourrout, Delsuc, Chourrout, Edvardsen, Rentzsch, Renfer, Jensen, Zhu, de Jong, Steele, Technau; (Journal Article)

Authors were clear about hockey-stick uncertainties.

Bradley, Hughes, Mann; (Journal Article)


Science

Astronomy. Do gamma ray bursts always line up with galaxies?

Schilling; (News)

Nuclear reprocessing. DOE outlines two roads to recycling spent fuel.

Kintisch; (News)

Long-distance dispersal of plants.

Nathan; (Journal Article)

Computer science. Creating a science of the Web.

Berners-Lee, Hall, Hendler, Shadbolt, Weitzner; (Journal Article)

Geophysics. Stealth tsunami surprises Indonesian coastal residents.

Kerr; (News)

Magnetic fields in the formation of sun-like stars.

Girart, Rao, Marrone; (Journal Article)

Jim Hanken profile. Shaking the dust off Agassiz's museum.

Pennisi; (News)

Career development. NSF wants PIs to mentor their postdocs.

Bhattacharjee; (News)

Jim Hanken profile. An outsider moves in.

Pennisi; (News)

Conflicting evidence about long-distance animal navigation.

Alerstam; (Journal Article)

An experimental study of the coloring problem on human subject networks.

Kearns, Suri, Montfort; (Journal Article)

Genomics. Biofuels to be focus of new DOE centers.

Kintisch; (News)

The ethics of influenza vaccination.

Silverstein; (Comment, Letter)

Science communication. Public acceptance of evolution.

Miller, Scott, Okamoto; (Journal Article)

Tequila, a neurotrypsin ortholog, regulates long-term memory formation in Drosophila.

Didelot, Molinari, Tchénio, Comas, Milhiet, Munnich, Colleaux, Preat; (Journal Article)

Science education. Evolution trumps intelligent design in Kansas vote.

Bhattarcharjee; (News)

Dodeca-CLE peptides as suppressors of plant stem cell differentiation.

Ito, Nakanomyo, Motose, Iwamoto, Sawa, Dohmae, Fukuda; (Journal Article)

Imaging. Brilliant X-rays reveal fruits of a brilliant mind.

Service; (News)

Theoretical physics. A reluctant convert.

Siegfried; (News)

Migration and Dispersal. Arduous journeys.

Morell; (News)

Hoxa2- and Rhombomere-Dependent Development of the Mouse Facial Somatosensory Map.

Oury, Murakami, Renaud, Pasqualetti, Charnay, Ren, Rijli; (JOURNAL ARTICLE)

When to Go, Where to Stop.

Sugden, Pennisi; (JOURNAL ARTICLE)

Back to the people.

Kennedy; (Editorial)

Evolution. Native mussel quickly evolves fear of invasive crab.

Stokstad; (Comment, News)

Insignificant change in Antarctic snowfall since the International Geophysical Year.

Monaghan, Bromwich, Fogt, Wang, Mayewski, Dixon, Ekaykin, Frezzotti, Goodwin, Isaksson, Kaspari, Morgan, Oerter, Van Ommen, Van der Veen, Wen; (Journal Article)

Polarized light cues underlie compass calibration in migratory songbirds.

Muheim, Phillips, Akesson; (Journal Article)

From individual dispersal to species ranges: perspectives for a changing world.

Kokko, López-Sepulcre; (Journal Article)

Imaging Intracellular Fluorescent Proteins at Nanometer Resolution.

Betzig, Patterson, Sougrat, Lindwasser, Olenych, Bonifacino, Davidson, Lippincott-Schwartz, Hess; (JOURNAL ARTICLE)

Migration and dispersal. As the seas warm.

Kintisch; (News)

Infectious diseases. Gastrointestinal virus strikes European cruise ships.

Enserink; (News)

Molecular imaging. New optics strategies cut through diffraction barrier.

Couzin; (News)

Theoretical physics. A 'landscape' too far?

Siegfried; (News)

Time-resolved seismic tomography detects magma intrusions at Mount Etna.

Patanè, Barberi, Cocina, De Gori, Chiarabba; (Journal Article)

Migration and Dispersal. Sound sightings.

Holden; (News)

Comment on "Gene regulatory networks and the evolution of animal body plans".

Coyne; (Comment, Journal Article)

France. Cancer chief calls it quits after controversy.

Enserink; (News)

Loss of a harvested fish species disrupts carbon flow in a diverse tropical river.

Taylor, Flecker, Hall; (Journal Article)

Geophysics. Toward "supervolcano" technology.

Foulger; (Comment, Journal Article)

Divergent induced responses to an invasive predator in marine mussel populations.

Freeman, Byers; (Journal Article)

Migration and Dispersal. Tag team.

Holden, Blackburn; (News)

Single-molecule, motion-based DNA sequencing using RNA polymerase.

Greenleaf, Block; (Journal Article)

Migration and Dispersal. Follow the footprints.

Unger; (News)

Astronomy. Testing star formation theory.

Crutcher; (Comment, Journal Article)

Opposing Activities Protect Against Age Onset Proteotoxicity.

Cohen, Bieschke, Perciavalle, Kelly, Dillin; (JOURNAL ARTICLE)

Escherichia coli induces DNA double-strand breaks in eukaryotic cells.

Nougayrède, Homburg, Taieb, Boury, Brzuszkiewicz, Gottschalk, Buchrieser, Hacker, Dobrindt, Oswald; (Journal Article)

Requirement for coronin 1 in T lymphocyte trafficking and cellular homeostasis.

Föger, Rangell, Danilenko, Chan; (Journal Article)

Immunology. When F-actin becomes too much of a good thing.

Dustin; (Comment, Journal Article)

Botany. Plant cells CLEave their way to differentiation.

Simon, Stahl; (Comment, Journal Article)

Satellite Gravity Measurements Confirm Accelerated Melting of Greenland Ice Sheet.

Chen, Wilson, Tapley; (JOURNAL ARTICLE)

How and why do insects migrate?

Holland, Wikelski, Wilcove; (Journal Article)

Astronomy. Low road to the heavens.

Anderson; (News)

A plant peptide encoded by CLV3 identified by in situ MALDI-TOF MS analysis.

Kondo, Sawa, Kinoshita, Mizuno, Kakimoto, Fukuda, Sakagami; (Journal Article)

Going east: new genetic and archaeological perspectives on the modern human colonization of Eurasia.

Mellars; (Journal Article)

Microbiology. Breaking the barrier between commensalism and pathogenicity.

Hayashi; (Comment, Journal Article)

Complex choices better made unconsciously?

Shanks; (Comment, Letter)

Migration and Dispersal. Inching toward movement ecology.

Holden; (News)


Nature Methods

Optimizing your optical tweezers.

Evanko; (Journal Article)

Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM).

Rust, Bates, Zhuang; (JOURNAL ARTICLE)

Going single, but not alone.

none; (Editorial)

Nanoscale resolution in GFP-based microscopy.

Willig, Kellner, Medda, Hein, Jakobs, Hell; (JOURNAL ARTICLE)

Circuit maps for the cell.

Eisenstein; (Journal Article)

Embryos and biopsies on the ChIP-ing forecast.

Kiermer; (Journal Article)

An affinity for new proteins.

Doerr; (Journal Article)


Nature Biotechnology

Transgenesis sunny-side up.

Sang; (Journal Article)

Biotech financing retrenches in Q2.

Lawrence; (Journal Article)

A regulatory perspective on in vitro diagnostics.

Gottlieb, Woodcock; (Journal Article)

Partnering for better microbial diagnostics.

Perkins, Small; (Journal Article)

The role of companion diagnostics in the development and use of mutation-targeted cancer therapies.

Papadopoulos, Kinzler, Vogelstein; (Journal Article)

People.

none; (Journal Article)

New-wave diagnostics.

Baker; (Journal Article)

Looking for solid ground along the Critical Path.

Ratner; (Journal Article)

Diagnostics investors think positive.

Lawrence; (Journal Article)

Moving diagnostics from the bench to the bedside.

Kling; (Journal Article)

Bundling next-generation cancer therapies for synergy.

Kling; (Journal Article)

Protein annotation by EBIMed.

Rebholz-Schuhmann, Kirsch, Arregui, Gaudan, Rynbeek, Stoehr; (Journal Article)

Profile: una ryan.

Schmidt; (Journal Article)

Shifting emphasis from pharmacogenomics to theragnostics.

Ozdemir, Williams-Jones, Glatt, Tsuang, Lohr, Reist; (JOURNAL ARTICLE)

Three barriers to innovative diagnostics.

Billings; (Journal Article)

Any diamonds in the diagnostic coal?

Jacobs; (Journal Article)

News in brief.

none; (Journal Article)

What brown cannot do for you.

Rimm; (JOURNAL ARTICLE)

How does DNA sequence motif discovery work?

D'haeseleer; (Journal Article)

All in the RNA family.

Davidson; (Journal Article)

Cancer biomarkers: a systems approach.

Hartwell, Mankoff, Paulovich, Ramsey, Swisher; (JOURNAL ARTICLE)

High-resolution computational models of genome binding events.

Qi, Rolfe, Macisaac, Gerber, Pokholok, Zeitlinger, Danford, Dowell, Fraenkel, Jaakkola, Young, Gifford; (Journal Article)

Not for the chicken-hearted.

none; (Journal Article)

Tysabri back on market.

Sheridan; (Journal Article)

Alfimeprase to succeed Genentech's alteplase?

Vastag; (Journal Article)

Reply to Export signals.

none; (Journal Article)

Should we make a fuss?

Miller, Conko; (Journal Article)

Recent patent applications in molecular diagnostics.

none; (Journal Article)

Corrigendum: Dual selection enhances the signaling specificity of a variant of the quorum-sensing transcriptional activator LuxR.

Collins, Leadbetter, Arnold; (Journal Article)

Export signals.

Gál, Végh, Závodszky, Vonderviszt; (Journal Article)

Belated approval of first recombinant protein from animal.

Schmidt; (Journal Article)

Should we make a fuss?

Witkowski; (Journal Article)

Corrigendum: Design of a genome-wide siRNA library using an artificial neural network.

Huesken, Lange, Mickanin, Weiler, Asselbergs, Warner, Meloon, Engel, Rosenberg, Cohen, Labow, Reinhardt, Natt, Hall; (Journal Article)

Translating in vivo diagnostics into clinical reality.

Frangioni; (Journal Article)

A reprise for collaborative financing in biotech.

Ransom; (Journal Article)

Genetic profiteering.

De Francesco; (Journal Article)

Emerging patent issues in genomic diagnostics.

Barton; (JOURNAL ARTICLE)

AAV hits the genomic bull's-eye.

Engelhardt; (Journal Article)

Corrigendum: Insights into US public biotech sector using patenting trends.

Aggarwal, Gupta, Bagchi-Sen; (Journal Article)

A change in the market-investing in diagnostics.

Batchelder, Miller; (Journal Article)

Corrigendum: ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.

Matsuyama, Arai, Yashiroda, Shirai, Kamata, Sekido, Kobayashi, Hashimoto, Hamamoto, Hiraoka, Horinouchi, Yoshida; (Journal Article)

Protein biomarker discovery and validation: the long and uncertain path to clinical utility.

Rifai, Gillette, Carr; (Journal Article)

Blueprint of an oil-eating bacterium.

de Lorenzo; (Journal Article)

The science-business tango.

Paul; (Journal Article)

Specificity by design.

Pabo; (Journal Article)

Lost in validation.

none; (Journal Article)

Corrigendum: Drugging the PI3 kinome.

Workman, Clarke, Guillard, Raynaud; (Journal Article)

Research highlights.

none; (Journal Article)


Nature Medicine

Schön et al. reply to "Efomycine M: an inhibitor of selectins?"

Wienrich, Oostingh, Ludwig, Enders, Harms, Tauber, Krahn, Kramer, Boehncke, Schön; (JOURNAL ARTICLE)

Exogenous control of mammalian gene expression via modulation of translational termination.

Murphy, Mostoslavsky, Kotton, Mulligan; (JOURNAL ARTICLE)

Memory T(H)2 cells induce alternatively activated macrophages to mediate protection against nematode parasites.

Anthony, Urban, Alem, Hamed, Rozo, Boucher, Van Rooijen, Gause; (Journal Article)

Targeted cancer therapeutics: the heartbreak of success.

Mann; (Journal Article)

Corrigendum: Cytokine-mediated deployment of SDF-1 induces revascularization through recruitment of CXCR4(+) hemangiocytes.

Jin, Shido, Kopp, Petit, Shmelkov, Young, Hooper, Amano, Avecilla, Heissig, Hattori, Zhang, Hicklin, Wu, Zhu, Dunn, Salari, Werb, Hackett, Crystal, Lyden, Rafii; (Journal Article)

Rules murky on DNA-based identification of disaster victims.

Opar; (Journal Article)

Side effects may include evolution.

Cirz, Gingles, Romesberg; (Journal Article)

Embryonic and tumorigenic pathways converge via Nodal signaling: role in melanoma aggressiveness.

Topczewska, Postovit, Margaryan, Sam, Hess, Wheaton, Nickoloff, Topczewski, Hendrix; (Journal Article)

Is cancer a disease of self-seeding?

Norton, Massagué; (Journal Article)

Tumor metastasis: mechanistic insights and clinical challenges.

Steeg; (Journal Article)

News In brief.

none; (Journal Article)

Move against malaria.

none; (Journal Article)

Apoptosis of vascular smooth muscle cells induces features of plaque vulnerability in atherosclerosis.

Clarke, Figg, Maguire, Davenport, Goddard, Littlewood, Bennett; (JOURNAL ARTICLE)

Ambitious AIDS grants deepen rift between researchers.

Basu; (Journal Article)

ErbB2 receptor tyrosine kinase signaling mediates early demyelination induced by leprosy bacilli.

Tapinos, Ohnishi, Rambukkana; (Journal Article)

Frequent cases force China to face up to scientific fraud.

Jia; (Journal Article)

DDT returns.

Mandavilli; (Journal Article)

Efomycine M: an inhibitor of selectins?

von Bonin, Buchmann, Bader, Rausch, Venstrom, Schäfer, Gründemann, Günther, Zorn, Nubbemeyer, Asadullah, Zollner; (Journal Article)

Research highlights.

none; (Journal Article)

A successful vaccine that missed its target.

Lambert; (Journal Article)

Tyrosine kinases: maiming myelin in leprosy.

Franklin, Zhao; (Journal Article)

Decidual NK cells regulate key developmental processes at the human fetal-maternal interface.

Hanna, Goldman-Wohl, Hamani, Avraham, Greenfield, Natanson-Yaron, Prus, Cohen-Daniel, Arnon, Manaster, Gazit, Yutkin, Benharroch, Porgador, Keshet, Yagel, Mandelboim; (JOURNAL ARTICLE)

A previously unidentified alternatively spliced isoform of t(8;21) transcript promotes leukemogenesis.

Yan, Kanbe, Peterson, Boyapati, Miao, Wang, Chen, Chen, Rowley, Willman, Zhang; (Journal Article)

US plan for routine HIV testing alarms privacy advocates.

Opar; (Journal Article)

Stopping cancer before it colonizes.

Rinker-Schaeffer, Hickson; (JOURNAL ARTICLE)

Embryogenesis meets tumorigenesis.

Lee, Herlyn; (Journal Article)

Anti-tobacco efforts going up in smoke.

Schubert; (Journal Article)

ALS: life and death in a bad neighborhood.

Monk, Shaw; (Journal Article)

Turning neurogenesis up a Notch.

Greenberg, Jin; (Journal Article)

Profile: amir attaran.

Check; (Journal Article)


Nature Genetics

JAK signaling globally counteracts heterochromatic gene silencing.

Shi, Calhoun, Xia, Li, Le, Li; (JOURNAL ARTICLE)

Population genomic analysis of outcrossing and recombination in yeast.

Ruderfer, Pratt, Seidel, Kruglyak; (JOURNAL ARTICLE)


Molecular Medicine


Proteomics

Reconstructing protein complexes: From proteomics to systems biology.

Armstrong, Pocklington, Cumiskey, Grant; (JOURNAL ARTICLE)

In this issue: Proteomics 16/2006.

none; (JOURNAL ARTICLE)

Proteomic profiles of induced hepatotoxicity at the subcellular level.

Zgoda, Tikhonova, Viglinskaya, Serebriakova, Lisitsa, Archakov; (JOURNAL ARTICLE)

High-coverage quantitative proteomics using amine-specific isotopic labeling.

Melanson, Avery, Pinto; (JOURNAL ARTICLE)

FPRL-1 induces modifications of migration-associated proteins in human neutrophils.

Boldt, Rist, Weiss, Weith, Lenter; (JOURNAL ARTICLE)

Proteomic response of Schizosaccharomyces pombe to static and oscillating extremely low-frequency electromagnetic fields.

Sinclair, Weeks, Butt, Worthington, Akpan, Jones, Waterfield, Allanand, Timms; (JOURNAL ARTICLE)

The Head behind the Headlines: "In this Issue" Editor Terry Landers.

Landers; (JOURNAL ARTICLE)

Proteomic analysis of the autoantibody response following immunization with a single autoantigen.

Mouquet, Drouot, Charlionnet, Arnoult, Bonnet-Bayeux, Thomas, Leprince, Joly, Tron, Gilbert; (JOURNAL ARTICLE)

Analysis of acidic peptides with a matrix-assisted laser desorption/ionization mass spectrometry using positive and negative ion modes with additive monoammonium phosphate.

Nabetani, Miyazaki, Tabuse, Tsugita; (JOURNAL ARTICLE)

HUPO Publications Committee Meeting 21 April 2006, San Francisco, CA, USA.

Orchard, Ping; (JOURNAL ARTICLE)

Proteomic analysis of pulmonary sclerosing hemangioma.

Jin, Shin, Jung, Lee, Cho, Han, Ha, Kim, Sik Kim, Sun Kim, Uhm, Kim; (JOURNAL ARTICLE)

Applying the SAGE technique to study the effects of electromagnetic field on biological systems.

Wang; (JOURNAL ARTICLE)

Proteomics and Beyond A report on the 3(rd) Annual Spring Workshop of the HUPO-PSI 21-23 April 2006, San Francisco, CA, USA.

Orchard, Apweiler, Barkovich, Field, Garavelli, Horn, Jones, Jones, Julian, McNally, Nerothin, Paton, Pizarro, Seymour, Taylor, Wiemann, Hermjakob; (JOURNAL ARTICLE)


Nature Drug Discovery


BMC Bioinformatics

Gene and protein nomenclature in public databases.

Fundel, Zimmer; (JOURNAL ARTICLE)

Text mining of full-text journal articles combined with gene expression analysis reveals a relationship between sphingosine-1-phosphate and invasiveness of a glioblastoma cell line.

Natarajan, Berrar, Dubitzky, Hack, Zhang, Desesa, Van Brocklyn, Bremer; (JOURNAL ARTICLE)

Robust Computational Reconstitution - a new method for the comparative analysis of gene expression in tissues and isolated cell fractions.

Hoffmann, Pohlers, Koczan, Thiesen, Woelfl, Kinne; (JOURNAL ARTICLE)

UniFrac - an online tool for comparing microbial community diversity in a phylogenetic context.

Lozupone, Hamady, Knight; (JOURNAL ARTICLE)

Automatic document classification of biological literature.

Chen, Muller, Sternberg; (JOURNAL ARTICLE)

Genome comparison using Gene Ontology (GO) with statistical testing.

Cai, Mao, Li, Wei; (JOURNAL ARTICLE)


Bioinformatics

HiRes - a tool for comprehensive assessment and interpretation of metabolomic data.

Zhao, Stoyanova, Du, Sajda, Brown; (JOURNAL ARTICLE)

A large quantity of novel human antisense transcripts detected by LongSAGE.

Ge, Wu, Jung, Chen, Wang; (JOURNAL ARTICLE)

The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria.

Makarova, Grishin, Koonin; (JOURNAL ARTICLE)

Robust inference of positive selection from recombining coding sequences.

Scheffler, Martin, Seoighe; (JOURNAL ARTICLE)

Branch and bound computation of exact p-values.

Bejerano; (JOURNAL ARTICLE)

MLR-tagging: informative SNP selection for unphased genotypes based on multiple linear regression.

He, Zelikovsky; (JOURNAL ARTICLE)

Few crucial links assure checkpoint efficiency in the yeast cell-cycle network.

Stoll, Rougemont, Naef; (JOURNAL ARTICLE)

Solvated docking: introducing water into the modelling of biomolecular complexes.

van Dijk, Bonvin; (JOURNAL ARTICLE)

MASQOT-GUI: spot quality assessment for the two-channel microarray platform.

Bylesjö, Sjödin, Eriksson, Antti, Moritz, Jansson, Trygg; (JOURNAL ARTICLE)

Significant sequence similarities in promoters and precursors of Arabidopsis thaliana non-conserved microRNAs.

Wang, Hindemitt, Mayer; (JOURNAL ARTICLE)

Identification of regulatory modules by co-clustering latent variable models: stem cell differentiation.

Joung, Shin, Seong, Zhang; (Journal Article)

Group testing for pathway analysis improves comparability of different microarray data sets.

Manoli, Gretz, Gröne, Kenzelmann, Eils, Brors; (JOURNAL ARTICLE)

COPA-cancer outlier profile analysis.

Macdonald, Ghosh; (JOURNAL ARTICLE)

ARFA: a program for annotating bacterial release factor genes, including prediction of programmed ribosomal frameshifting.

Bekaert, Atkins, Baranov; (JOURNAL ARTICLE)

Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information.

Capriotti, Calabrese, Casadio; (JOURNAL ARTICLE)

UniGene Tabulator: a full parser for the UniGene format.

Lenzi, Frabetti, Facchin, Casadei, Vitale, Canaider, Carinci, Zannotti, Strippoli; (JOURNAL ARTICLE)


Proc Natl Acad Sci U S A

Myosin-X is a molecular motor that functions in filopodia formation.

Bohil, Robertson, Cheney; (JOURNAL ARTICLE)

Analysis of Aurignacian interstratification at the Chatelperronian-type site and implications for the behavioral modernity of Neandertals.

Zilhão, d'Errico, Bordes, Lenoble, Texier, Rigaud; (JOURNAL ARTICLE)

Monitoring molecular dynamics using coherent electrons from high harmonic generation.

Wagner, Wüest, Christov, Popmintchev, Zhou, Murnane, Kapteyn; (JOURNAL ARTICLE)

Smallpox transmission and control: Spatial dynamics in Great Britain.

Riley, Ferguson; (JOURNAL ARTICLE)

Crystallography on curved surfaces.

Vitelli, Lucks, Nelson; (JOURNAL ARTICLE)

Rewiring the severe acute respiratory syndrome coronavirus (SARS-CoV) transcription circuit: Engineering a recombination-resistant genome.

Yount, Roberts, Lindesmith, Baric; (JOURNAL ARTICLE)

Embryonic stem cells make human T cells.

Fleming, Scadden; (JOURNAL ARTICLE)

Competitive recruitment of the periplasmic translocation portal TolB by a natively disordered domain of colicin E9.

Loftus, Walker, Maté, Bonsor, James, Moore, Kleanthous; (JOURNAL ARTICLE)

A Ca2+ signaling pathway regulates a K+ channel for low-K response in Arabidopsis.

Li, Kim, Cheong, Pandey, Luan; (JOURNAL ARTICLE)

Stable neuron numbers from cradle to grave.

Nowakowski; (JOURNAL ARTICLE)

Voltage-dependent conformational changes in human Ca2+- and voltage-activated K+ channel, revealed by voltage-clamp fluorometry.

Savalli, Kondratiev, Toro, Olcese; (JOURNAL ARTICLE)

The active FMR1 promoter is associated with a large domain of altered chromatin conformation with embedded local histone modifications.

Gheldof, Tabuchi, Dekker; (JOURNAL ARTICLE)

Follicle-stimulating hormone/cAMP regulation of aromatase gene expression requires {beta}-catenin.

Parakh, Hernandez, Grammer, Weck, Hunzicker-Dunn, Zeleznik, Nilson; (JOURNAL ARTICLE)

Osteogenic differentiation of mouse adipose-derived adult stromal cells requires retinoic acid and bone morphogenetic protein receptor type IB signaling.

Wan, Shi, Nacamuli, Quarto, Lyons, Longaker; (JOURNAL ARTICLE)

Permanent carbon dioxide storage in deep-sea sediments.

House, Schrag, Harvey, Lackner; (JOURNAL ARTICLE)

Infiltrating neutrophils mediate the initial angiogenic switch in a mouse model of multistage carcinogenesis.

Nozawa, Chiu, Hanahan; (JOURNAL ARTICLE)

Ouabain affinity determining residues lie close to the Na/K pump ion pathway.

Artigas, Gadsby; (JOURNAL ARTICLE)

The structure of the endoribonuclease XendoU: From small nucleolar RNA processing to severe acute respiratory syndrome coronavirus replication.

Renzi, Caffarelli, Laneve, Bozzoni, Brunori, Vallone; (JOURNAL ARTICLE)

Archaeal nitrification in the ocean.

Wuchter, Abbas, Coolen, Herfort, van Bleijswijk, Timmers, Strous, Teira, Herndl, Middelburg, Schouten, Sinninghe Damsté; (JOURNAL ARTICLE)

Model-based analysis of tiling-arrays for ChIP-chip.

Johnson, Li, Meyer, Gottardo, Carroll, Brown, Liu; (JOURNAL ARTICLE)

TAF4 nucleates a core subcomplex of TFIID and mediates activated transcription from a TATA-less promoter.

Wright, Marr, Tjian; (JOURNAL ARTICLE)

Mutational analysis of DJ-1 in Drosophila implicates functional inactivation by oxidative damage and aging.

Meulener, Xu, Thompson, Ischiropoulos, Bonini; (JOURNAL ARTICLE)

Eastern North America as an independent center of plant domestication.

Smith; (JOURNAL ARTICLE)

Calbindin D9k knockout mice are indistinguishable from wild-type mice in phenotype and serum calcium level.

Kutuzova, Akhter, Christakos, Vanhooke, Kimmel-Jehan, Deluca; (JOURNAL ARTICLE)

Molecular and functional analysis of nicotinate catabolism in Eubacterium barkeri.

Alhapel, Darley, Wagener, Eckel, Elsner, Pierik; (JOURNAL ARTICLE)

Transforming properties of YAP, a candidate oncogene on the chromosome 11q22 amplicon.

Overholtzer, Zhang, Smolen, Muir, Li, Sgroi, Deng, Brugge, Haber; (JOURNAL ARTICLE)

The essential GTPase YphC displays a major domain rearrangement associated with nucleotide binding.

Muench, Xu, Sedelnikova, Rice; (JOURNAL ARTICLE)

Interstellar H3+

Oka; (JOURNAL ARTICLE)

Severe acute respiratory syndrome-associated coronavirus 3a protein forms an ion channel and modulates virus release.

Lu, Zheng, Xu, Schwarz, Du, Wong, Chen, Duan, Deubel, Sun; (JOURNAL ARTICLE)

Resonance Raman spectroscopy of chloroperoxidase compound II provides direct evidence for the existence of an iron(IV)-hydroxide.

Stone, Behan, Green; (JOURNAL ARTICLE)

Nature designs tough collagen: Explaining the nanostructure of collagen fibrils.

Buehler; (JOURNAL ARTICLE)

Topical interests and the mitigation of search engine bias.

Fortunato, Flammini, Menczer, Vespignani; (JOURNAL ARTICLE)

A codon deletion confers resistance to herbicides inhibiting protoporphyrinogen oxidase.

Patzoldt, Hager, McCormick, Tranel; (JOURNAL ARTICLE)

Phosphate acquisition genes in Prochlorococcus ecotypes: Evidence for genome-wide adaptation.

Martiny, Coleman, Chisholm; (JOURNAL ARTICLE)

Involvement of Toll-like receptor 5 in the recognition of flagellated bacteria.

Feuillet, Medjane, Mondor, Demaria, Pagni, Galán, Flavell, Alexopoulou; (JOURNAL ARTICLE)

Poxy models and rash decisions.

Cooper; (JOURNAL ARTICLE)

Viral tracing identifies distributed columnar organization in the olfactory bulb.

Willhite, Nguyen, Masurkar, Greer, Shepherd, Chen; (JOURNAL ARTICLE)

Sex- and clock-controlled expression of the neuropeptide F gene in Drosophila.

Lee, Bahn, Park; (JOURNAL ARTICLE)

Chemistry in low-mass protostellar and protoplanetary regions.

van Dishoeck; (JOURNAL ARTICLE)

Cortical feedback depolarization waves: A mechanism of top-down influence on early visual areas.

Roland, Hanazawa, Undeman, Eriksson, Tompa, Nakamura, Valentiniene, Ahmed; (JOURNAL ARTICLE)

Structure-activity relationships by interligand NOE-based design and synthesis of antiapoptotic compounds targeting Bid.

Becattini, Culmsee, Leone, Zhai, Zhang, Crowell, Rega, Landshamer, Reed, Plesnila, Pellecchia; (JOURNAL ARTICLE)

Epigenetic properties of white-opaque switching in Candida albicans are based on a self-sustaining transcriptional feedback loop.

Zordan, Galgoczy, Johnson; (JOURNAL ARTICLE)

A redox-active FKBP-type immunophilin functions in accumulation of the photosystem II supercomplex in Arabidopsis thaliana.

Lima, Lima, Wong, Phillips, Buchanan, Luan; (JOURNAL ARTICLE)

Glycoproteomic probes for fluorescent imaging of fucosylated glycans in vivo.

Sawa, Hsu, Itoh, Sugiyama, Hanson, Vogt, Wong; (JOURNAL ARTICLE)

Agriculture: The selector of improbable mutations.

Gressel, Levy; (JOURNAL ARTICLE)

Monte Carlo studies of surface chemistry and nonthermal desorption involving interstellar grains.

Herbst, Cuppen; (JOURNAL ARTICLE)

Evaluation of RNA-binding specificity of aminoglycosides with DNA microarrays.

Liang, Greenberg, Hammond, Hoffmann, Head, Wong; (JOURNAL ARTICLE)

Wolbachia transinfection in Aedes aegypti: A potential gene driver of dengue vectors.

Ruang-Areerate, Kittayapong; (JOURNAL ARTICLE)

Linkage between cellular communications, energy utilization, and proliferation in metastatic neuroendocrine cancers.

Ippolito, Merritt, Bäckhed, Moulder, Mennerick, Manchester, Gammon, Piwnica-Worms, Gordon; (JOURNAL ARTICLE)

Interstellar chemistry.

Klemperer; (JOURNAL ARTICLE)

Transient receptor potential family members PKD1L3 and PKD2L1 form a candidate sour taste receptor.

Ishimaru, Inada, Kubota, Zhuang, Tominaga, Matsunami; (JOURNAL ARTICLE)

The chemistry in circumstellar envelopes of evolved stars: Following the origin of the elements to the origin of life.

Ziurys; (JOURNAL ARTICLE)

Inhibition of protein aggregation in vitro and in vivo by a natural osmoprotectant.

Ignatova, Gierasch; (JOURNAL ARTICLE)

Broad-spectrum biofilm inhibition by a secreted bacterial polysaccharide.

Valle, Da Re, Henry, Fontaine, Balestrino, Latour-Lambert, Ghigo; (JOURNAL ARTICLE)

Ice-age endurance: DNA evidence of a white spruce refugium in Alaska.

Anderson, Hu, Nelson, Petit, Paige; (JOURNAL ARTICLE)

Type 1, type 1.5, and type 2 diabetes: NOD the diabetes we thought it was.

Donath, Ehses; (JOURNAL ARTICLE)

West Nile virus in complex with the Fab fragment of a neutralizing monoclonal antibody.

Kaufmann, Nybakken, Chipman, Zhang, Diamond, Fremont, Kuhn, Rossmann; (JOURNAL ARTICLE)

Solute-induced retardation of water dynamics probed directly by terahertz spectroscopy.

Heugen, Schwaab, Bründermann, Heyden, Yu, Leitner, Havenith; (JOURNAL ARTICLE)

Finding neuroelectric activity under magnetic-field oscillations (NAMO) with magnetic resonance imaging in vivo.

Truong, Song; (JOURNAL ARTICLE)

Early evolution of animal cell signaling and adhesion genes.

Nichols, Dirks, Pearse, King; (JOURNAL ARTICLE)

Resorcinarenes are hexameric capsules in solution.

Evan-Salem, Baruch, Avram, Cohen, Palmer, Rebek; (JOURNAL ARTICLE)

Metabolic profiling reveals a contribution of gut microbiota to fatty liver phenotype in insulin-resistant mice.

Dumas, Barton, Toye, Cloarec, Blancher, Rothwell, Fearnside, Tatoud, Blanc, Lindon, Mitchell, Holmes, McCarthy, Scott, Gauguier, Nicholson; (JOURNAL ARTICLE)

Interferometric observations of large biologically interesting interstellar and cometary molecules.

Snyder; (JOURNAL ARTICLE)

Basonuclins 1 and 2, whose genes share a common origin, are proteins with widely different properties and functions.

Vanhoutteghem, Djian; (JOURNAL ARTICLE)

Prenatal exposure to ultrasound waves impacts neuronal migration in mice.

Ang, Gluncic, Duque, Schafer, Rakic; (JOURNAL ARTICLE)

The galactic cosmic ray ionization rate.

Dalgarno; (JOURNAL ARTICLE)

Profile of Ewine F. van Dishoeck.

Zagorski; (JOURNAL ARTICLE)

The first three domains of the insulin receptor differ structurally from the insulin-like growth factor 1 receptor in the regions governing ligand specificity.

Lou, Garrett, McKern, Hoyne, Epa, Bentley, Lovrecz, Cosgrove, Frenkel, Ward; (JOURNAL ARTICLE)

Condition and fate of logged forests in the Brazilian Amazon.

Asner, Broadbent, Oliveira, Keller, Knapp, Silva; (JOURNAL ARTICLE)

Detection of low-frequency lambda-doublet transitions of the free 12CH and 13CH radicals.

McCarthy, Mohamed, Brown, Thaddeus; (JOURNAL ARTICLE)

Infant brains detect arithmetic errors.

Berger, Tzur, Posner; (JOURNAL ARTICLE)

Neocortical neurogenesis in humans is restricted to development.

Bhardwaj, Curtis, Spalding, Buchholz, Fink, Björk-Eriksson, Nordborg, Gage, Druid, Eriksson, Frisén; (JOURNAL ARTICLE)

End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation.

Möglich, Joder, Kiefhaber; (JOURNAL ARTICLE)

Convergent evidence that oligodendrocyte lineage transcription factor 2 (OLIG2) and interacting genes influence susceptibility to schizophrenia.

Georgieva, Moskvina, Peirce, Norton, Bray, Jones, Holmans, Macgregor, Zammit, Wilkinson, Williams, Nikolov, Williams, Ivanov, Davis, Haroutunian, Buxbaum, Craddock, Kirov, Owen, O'donovan; (JOURNAL ARTICLE)

Vaccination against weight gain.

Zorrilla, Iwasaki, Moss, Chang, Otsuji, Inoue, Meijler, Janda; (JOURNAL ARTICLE)

Nonobese diabetic mice express aspects of both type 1 and type 2 diabetes.

Chaparro, Konigshofer, Beilhack, Shizuru, McDevitt, Chien; (JOURNAL ARTICLE)

Vesicles surfing on a lipid bilayer: Self-induced haptotactic motion.

Solon, Streicher, Richter, Brochard-Wyart, Bassereau; (JOURNAL ARTICLE)

Stress and the suppression of subordinate reproduction in cooperatively breeding meerkats.

Young, Carlson, Monfort, Russell, Bennett, Clutton-Brock; (Journal Article)


N Engl J Med

Neonatal-onset multisystem inflammatory disease responsive to interleukin-1beta inhibition.

Goldbach-Mansky, Dailey, Canna, Gelabert, Jones, Rubin, Kim, Brewer, Zalewski, Wiggs, Hill, Turner, Karp, Aksentijevich, Pucino, Penzak, Haverkamp, Stein, Adams, Moore, Fuhlbrigge, Shaham, Jarvis, O'Neil, Vehe, Beitz, Gardner, Hannan, Warren, Horn, Cole, Paul, Hawkins, Pham, Snyder, Wesley, Hoffmann, Holland, Butman, Kastner; (Journal Article)

Case records of the Massachusetts General Hospital. Case 24-2006. A 40-year-old woman with hypotension after an overdose of amlodipine.

Harris; (Clinical Conference, Journal Article)

DNA testing, banking, and genetic privacy.

Roche, Annas; (Journal Article)

High-dose atorvastatin after stroke or transient ischemic attack.

Amarenco, Bogousslavsky, Callahan, Goldstein, Hennerici, Rudolph, Sillesen, Simunovic, Szarek, Welch, Zivin; (Journal Article)

Clinical practice. Paget's disease of bone.

Whyte; (Journal Article)

Imatinib and altered bone and mineral metabolism.

Owen, Hatfield, Letvak; (Comment, Letter)

A genomic strategy to refine prognosis in early-stage non-small-cell lung cancer.

Potti, Mukherjee, Petersen, Dressman, Bild, Koontz, Kratzke, Watson, Kelley, Ginsburg, West, Harpole, Nevins; (Journal Article)

A proposal for radical changes in the drug-approval process.

Wood; (Journal Article)

Concordance among gene-expression-based predictors for breast cancer.

Fan, Oh, Wessels, Weigelt, Nuyten, Nobel, van't Veer, Perou; (Journal Article)

Images in clinical medicine. Inguinal hernia.

Rosmarin, Tan; (Journal Article)

Severe anomaly of coronary-artery development.

Legendre, Houyel, Serraf; (Letter)

Turning the page at the CMAJ.

Steinbrook; (Journal Article)

Genes on the Web--direct-to-consumer marketing of genetic testing.

Wolfberg; (Journal Article)

Stroke--an equal opportunity for the initiation of statin therapy.

Kent; (Comment, Editorial)

Arthrocentesis video.

Disla; (Comment, Letter)

Images in clinical medicine. Adie's pupil in the Ross syndrome.

Hagemann, Bartke; (Journal Article)

Inhaled corticosteroids and children.

Köhler, Haidl, Dellweg; (Comment, Letter)

Preimplantation diagnosis for genetic susceptibility.

Braude; (Journal Article)

Thrombotic thrombocytopenic purpura.

Matzdorff; (Comment, Letter)

Molecular signatures predict outcomes of breast cancer.

O'Shaughnessy; (Comment, Editorial)


J Natl Cancer Inst


Lancet

ESPRIT trial.

O'Donnell, Eikelboom; (Comment, Letter)

ESPRIT trial.

Flaherty, Kissela, Broderick; (Comment, Letter)

The 10-year struggle to provide antiretroviral treatment to people with HIV in the developing world.

Schwartländer, Grubb, Perriëns; (Journal Article)

CD4-guided scheduled treatment interruptions compared with continuous therapy for patients infected with HIV-1: results of the Staccato randomised trial.

Ananworanich, Gayet-Ageron, Le Braz, Prasithsirikul, Chetchotisakd, Kiertiburanakul, Munsakul, Raksakulkarn, Tansuphasawasdikul, Sirivichayakul, Cavassini, Karrer, Genné, Nüesch, Vernazza, Bernasconi, Leduc, Satchell, Yerly, Perrin, Hill, Perneger, Phanuphak, Furrer, Cooper, Ruxrungtham, Hirschel; (Journal Article)

Circumcision and HIV prevention research: an ethical analysis.

Lie, Emanuel, Grady; (Journal Article)

HIV/AIDS harm reduction in Iran.

Razzaghi, Nassirimanesh, Afshar, Ohiri, Claeson, Power; (Journal Article)

The WHO public-health approach to antiretroviral treatment against HIV in resource-limited settings.

Gilks, Crowley, Ekpini, Gove, Perriens, Souteyrand, Sutherland, Vitoria, Guerma, De Cock; (Journal Article)

Persistent pyrexia and plaques: a perplexing puzzle.

Mosam, Moodley, Ramdial; (Journal Article)

The case for expanding access to highly active antiretroviral therapy to curb the growth of the HIV epidemic.

Montaner, Hogg, Wood, Kerr, Tyndall, Levy, Harrigan; (Journal Article)

WHO: strengthening the road to renewal.

Cohen; (Comment, Letter)

The business of HIV/AIDS.

none; (Editorial)

Beyond stigma: social responses to HIV in South Africa.

Jewkes; (Journal Article)

Informing children of their HIV status.

Nöstlinger, Colebunders; (Comment, Letter)

Absorptive capacity and disbursements by the Global Fund to Fight AIDS, Tuberculosis and Malaria: analysis of grant implementation.

Lu, Michaud, Khan, Murray; (Journal Article)

Betting on HIV prevention.

none; (Editorial)

What does absorption capacity not measure?

Bhutta; (Comment, Journal Article)

HAART for the HIV-infected employees of large companies in Africa.

Van der Borght, Rinke de Wit, Janssens, Schim van der Loeff, Rijckborst, Lange; (Journal Article)

Scaling up antiretroviral treatment in resource-poor settings.

Batz, Guillerm, Gonsalves; (Comment, Letter)

The KLEAN study of fosamprenavir-ritonavir versus lopinavir-ritonavir, each in combination with abacavir-lamivudine, for initial treatment of HIV infection over 48 weeks: a randomised non-inferiority trial.

Eron, Yeni, Gathe, Estrada, DeJesus, Staszewski, Lackey, Katlama, Young, Yau, Sutherland-Phillips, Wannamaker, Vavro, Patel, Yeo, Shaefer; (Journal Article)

ESPRIT trial.

von Maxen, Wille, Schoenhoefer; (Comment, Letter)

Scaling up antiretroviral treatment in resource-poor settings.

Harris; (Comment, Letter)

Russia's blossoming civil society holds the key to HIV.

Brown; (News)

AIDS: from crisis management to sustained strategic response.

Piot; (Journal Article)

AIDS anniversaries in 2006 mark the time to deliver.

Gayle; (Journal Article)

HIV treatment response and prognosis in Europe and North America in the first decade of highly active antiretroviral therapy: a collaborative analysis.

May, Sterne, Costagliola, Sabin, Phillips, Justice, Dabis, Gill, Lundgren, Hogg, de Wolf, Fätkenheuer, Staszewski, d'Arminio Monforte, Egger; (Journal Article)

Microbicides: stopping HIV at the gate.

Stone, Jiang; (Journal Article)

Durable efficacy of tipranavir-ritonavir in combination with an optimised background regimen of antiretroviral drugs for treatment-experienced HIV-1-infected patients at 48 weeks in the Randomized Evaluation of Strategic Intervention in multi-drug reSistant patients with Tipranavir (RESIST) studies: an analysis of combined data from two randomised open-label trials.

Hicks, Cahn, Cooper, Walmsley, Katlama, Clotet, Lazzarin, Johnson, Neubacher, Mayers, Valdez; (Journal Article)

Heart disease in Africa.

Opie; (Comment, Letter)

Fight AIDS as well as the brain drain.

Feeley; (Journal Article)

ESPRIT trial - Authors' reply.

Halkes, van Gijn, Kappelle, Koudstaal, Algra; (LETTER)

Vaccines to prevent transmission of HIV-1 via breastmilk: scientific and logistical priorities.

Luzuriaga, Newell, Dabis, Excler, Sullivan; (Journal Article)

Coordinating HIV control efforts.

Whyms, Huijts, Jensen; (Comment, Letter)

The devastating effects of HIV/AIDS on children.

none; (Editorial)

Ernest Darkoh: confronting the challenge of HIV/AIDS in Africa.

Kapp; (News)

HAART's first decade: success brings further challenges.

Dore, Cooper; (Comment, Journal Article)

Scaling up antiretroviral treatment in resource-poor settings.

Ellman, Ford; (Letter)

ESPRIT trial.

Filippi; (Comment, Letter)

Ellis Samols.

Pincock; (Biography, Historical Article, Journal Article)

Preventing scientific misconduct.

Chalmers; (Comment, Letter)

Russia, the G8, and HIV.

Malinowska-Sempruch; (Comment, Letter)

HIV/AIDS epidemiology, pathogenesis, prevention, and treatment.

Simon, Ho, Abdool Karim; (Journal Article)

An examination of the Global Fund at 5 years.

Feachem, Sabot; (Journal Article)


Expert Rev Mol Diagn